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Non profit Organization Penalties

Failure to file the annual information return or filing an incomplete return is subject to a penalty under IRC §6652(c)(1)(A). A penalty of $20 per day is imposed for failure to file. The maximum penalty is the lesser of $10,000 or 5% of gross receipts for the year. No penalty is imposed if reasonable cause can be shown.

For non profit organizations with $1,000,000 or more in gross receipts the penalty for failure to file timely or to include correct information is $100 per day, up to $50,000 maximum. 

100% Penalty, Volunteer Workers: The Trust Fund Recovery Penalty [IRC §6672] for failure to withhold and remit payroll taxes will not be assessed against the following: unpaid volunteers, volunteer trustees, or directors of a

Intermediate Penalties

The Taxpayer Bill of Rights II of 1996 created intermediate penalties for excess benefit transactions with "disqualified persons" and private inurement within

— Private Inurement: Shareholders or individuals share in the net earnings of the non profit entity.
— Excess Benefit:
Amount by which the economic benefit provided by the non profit for services or property exceeds the FMV of the consideration received.

A Disqualified Person is a person, family member of that person, or 35% controlled entity in a position to exercise "substantial influence" over the non profit organization’s affairs.

A person with substantial influence is anyone who:

bulletServes as a voting member on the non profit organization’s governing body.
bulletHas powers of the CEO, COO, CFO, or Treasurer.
bulletHas responsibility for managing the non profit organization’s financial assets, regardless of title.
bulletHas material financial interests in certain provider-sponsored non profit organizations.

Previously, sanctions for these violations resulted in loss of exempt status, but provided no recourse to punish the people involved in the abuse. IRC §4958 imposes excise taxes on both the individual who benefited, and on the

Penalties:

—Tier-1: For the individual, the penalty is an excise tax equal to 25% of the excess benefit with no maximum penalty. For non profit managers involved, the penalty is an excise tax equal to 10% of the excess benefit with a $10,000 maximum.

—Tier-2: If the abuses are not corrected within the taxable period, an additional penalty tax of 200% of the excess benefit is imposed on the individual.  

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